Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19197922
2
CONN : functional connectivity toolbox
2052221
3
1000 Functional Connectomes Project
2003557
4
MRIcron
1316664
5
JIST: Java Image Science Toolkit
889395
6
imcalc: Batch image calulations and transformations for SPM
724965
7
BrainNet Viewer
662258
8
Computational Morphometry Toolkit (CMTK)
658376
9
DTI-TK
636261
10
Vaa3D and Vaa3D-Neuron
617888
11
WFU_PickAtlas
557635
12
SPHARM-PDM Toolbox
490410
13
BioImage Suite
489596
14
Automatic Registration Toolbox
486169
15
GIFTI
445859
16
IBSR
402075
17
PANDA: a pipeline tool for diffusion MRI
398386
18
ABC (Atlas Based Classification)
395443
19
MRIcroGL
376934
20
Artifact Detection Tools (ART)
345254
21
DWI/DTI Quality Control Tool: DTIPrep
338774
22
Diffusional Kurtosis Estimator
309637
23
NIfTI
309454
24
Human Imaging Database (HID)
304314
25
Web Game for Collaborative Labeling
300708
26
3D Slicer
299784
27
The Neuro Bureau
292919
28
BXH/XCEDE Tools
289947
29
TOADS-CRUISE Brain Segmentation Tools
279400
30
BrainVisa Morphologist extensions
278332
31
SRI24 Atlas: Normal Adult Brain Anatomy
273733
32
Functional Imaging BIRN
270608
33
IIT Human Brain Atlas (v.5.0)
253972
34
HAMMER: Deformable Registration
252090
35
GRETNA
248028
36
eConnectome
246427
37
Generalized PPI Toolbox
242560
38
ARCTIC
240886
39
fMRI-CPCA
235321
40
Mango
233619
41
Conferences, Workshops and Meetings
229367
42
MRtrix
227067
43
PESTICA & SLOMOCO: physio and motion correction tools
226331
44
VMTK in 3D Slicer
225129
45
Network-Based Statistic (NBS)
225064
46
BrainVoyager Brain Tutor
222390
47
Hammer And WML Modules for 3D Slicer
222308
48
NeuroImaging Analysis Kit (NIAK)
221673
49
FSL
220786
50
BRAINSTools
219124
51
CANDI Neuroimaging Access Point
217955
52
Brain Connectivity Toolbox
215419
53
FiberViewerLight
214647
54
AFNI
214000
55
Pipeline system for Octave and Matlab
213613
56
Talairach Daemon
213241
57
AutoSeg
213050
58
ITK-SNAP
211337
59
DTIProcess ToolKit
211210
60
Diffusion Toolkit / TrackVis
207085
61
SPM
204356
62
Multi-Modal MRI Reproducibility Resource
197796
63
REX
197795
64
FBIRN Image Processing Scripts (FIPS)
195970
65
BrainMap Database
195653
66
DICOM_UploadGUI
194271
67
MRI Studio
192615
68
SnPM
189203
69
Camino
188975
70
dcm2nii
187275
71
SVV
186938
72
Maps4Mipav (Exploratory JIST)
186731
73
Spatially Constrained Parcellation
186693
74
NeuroDebian
186270
75
R-package for adaptive fMRI analysis
184900
76
ASHS: Automatic Segmentation of Hippocampal Subfields
184841
77
3DSlicerLupusLesionModule
184763
78
BrainMask Volume Processing Tool
184386
79
DicomBrowser
184358
80
XNAT
183565
81
Numerical Fibre Generator (NFG)
181305
82
xjView, a viewing tool for SPM
181186
83
Slicer3 Example Modules
181108
84
BASH4RfMRI
181068
85
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
180942
86
JIP fMRI Analysis Toolkit
180526
87
GTRACT
180163
88
MIView
180005
89
Grantees Meeting for NITRC
179848
90
LONI Debabeler
179298
91
FSL extensions
179241
92
N3 - MINC B0 nonuniformity correction
178454
93
Level-set Segmentation for Slicer3
177981
94
E-Prime
176882
95
Group ICA Toolbox (GIFT and EEGIFT)
175505
96
VAMCA Cortical Meta-analysis Toolbox
174722
97
DTI Fiber Tract Statistics
173624
98
Slicer3 Module Rician noise filter
173461
99
BRAINSFit
173081
100
FreeSurfer
172956