PubMed Mentions
The links below are to publications on PubMed referring to NiftyReg. This list is gathered weekly from PubMed automatically.
| Publication/References | |
| Tractography-based parcellation does not provide strong evidence of anatomical organisation within the thalamus. Description: Clayden, Jonathan D, et al. Tractography-based parcellation does not provide strong evidence of anatomical organisation within the thalamus. ''Neuroimage''. 2019 Oct 1; '''199''': 418-426 | |
| Generalised boundary shift integral for longitudinal assessment of spinal cord atrophy. Description: Prados, Ferran, et al. Generalised boundary shift integral for longitudinal assessment of spinal cord atrophy. ''Neuroimage''. 2020 Apr 1; '''209''': 116489 | |
| AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation. Description: Coupe, Pierrick, et al. AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation. ''Neuroimage''. 2020 Oct 1; '''219''': 117026 | |
| Axon diameter index estimation independent of fiber orientation distribution using high-gradient diffusion MRI. Description: Fan, Qiuyun, et al. Axon diameter index estimation independent of fiber orientation distribution using high-gradient diffusion MRI. ''Neuroimage''. 2020 Nov 15; '''222''': 117197 | |
| Quantity versus quality: Age-related differences in muscle volume, intramuscular fat, and mechanical properties in the triceps surae. Description: Pinel, Sabrina, et al. Quantity versus quality: Age-related differences in muscle volume, intramuscular fat, and mechanical properties in the triceps surae. ''Exp Gerontol''. 2021 Dec; '''156''': 111594 | |
| Magnetic susceptibility anisotropy in normal appearing white matter in multiple sclerosis from single-orientation acquisition. Description: Sibgatulin, Renat, et al. Magnetic susceptibility anisotropy in normal appearing white matter in multiple sclerosis from single-orientation acquisition. ''Neuroimage Clin''. 2022; '''35''': 103059 | |
| DIR-based models to predict weekly anatomical changes in head and neck cancer proton therapy. Description: Zhang, Ying, et al. DIR-based models to predict weekly anatomical changes in head and neck cancer proton therapy. ''Phys Med Biol''. 2022 Apr 15; '''67''' (9): | |
| Volumetric analysis of the piriform cortex in temporal lobe epilepsy. Description: Iqbal, Sabahat, et al. Volumetric analysis of the piriform cortex in temporal lobe epilepsy. ''Epilepsy Res''. 2022 Sep; '''185''': 106971 | |
| Pre-treatment analysis of non-rigid variations can assist robust intensity-modulated proton therapy plan selection for head and neck patients. Description: Zhang, Ying, et al. Pre-treatment analysis of non-rigid variations can assist robust intensity-modulated proton therapy plan selection for head and neck patients. ''Med Phys''. 2022 Dec; '''49''' (12):7683-7693 | |
| ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset. Description: Hernandez Petzsche, Moritz R, et al. ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset. ''Sci Data''. 2022 Dec 10; '''9''' (1):762 | |
| Free-running 3D whole-heart T(1) and T(2) mapping and cine MRI using low-rank reconstruction with non-rigid cardiac motion correction. Description: Phair, Andrew, et al. Free-running 3D whole-heart T(1) and T(2) mapping and cine MRI using low-rank reconstruction with non-rigid cardiac motion correction. ''Magn Reson Med''. 2023 Jan; '''89''' (1):217-232 | |
| Effects of bolus injection duration on perfusion estimates in dynamic CT and dynamic susceptibility contrast MRI. Description: Arvidsson, Jonathan, et al. Effects of bolus injection duration on perfusion estimates in dynamic CT and dynamic susceptibility contrast MRI. ''MAGMA''. 2023 Feb; '''36''' (1):95-106 | |
| Relationship between paramagnetic rim lesions and slowly expanding lesions in multiple sclerosis. Description: Calvi, Alberto, et al. Relationship between paramagnetic rim lesions and slowly expanding lesions in multiple sclerosis. ''Mult Scler''. 2023 Mar; '''29''' (3):352-362 | |
| Single-heartbeat cardiac cine imaging via jointly regularized nonrigid motion-corrected reconstruction. Description: Cruz, Gastao, et al. Single-heartbeat cardiac cine imaging via jointly regularized nonrigid motion-corrected reconstruction. ''NMR Biomed''. 2023 Mar 30; '''36''' (9):e4942 | |
| Aberrant olfactory network functional connectivity in people with olfactory dysfunction following COVID-19 infection: an exploratory, observational study. Description: Wingrove, Jed, et al. Aberrant olfactory network functional connectivity in people with olfactory dysfunction following COVID-19 infection: an exploratory, observational study. ''EClinicalMedicine''. 2023 Apr; '''58''': 101883 | |
| Frequency-specific gaze modulation of emotional face processing in the human amygdala. Description: Guex, Raphael, et al. Frequency-specific gaze modulation of emotional face processing in the human amygdala. ''Cereb Cortex''. 2023 Apr 4; '''33''' (8):4859-4869 | |
| Feasibility of in vivo multi-parametric quantitative magnetic resonance imaging of the healthy sciatic nerve with a unified signal readout protocol. Description: Boonsuth, Ratthaporn, et al. Feasibility of in vivo multi-parametric quantitative magnetic resonance imaging of the healthy sciatic nerve with a unified signal readout protocol. ''Sci Rep''. 2023 Apr 21; '''13''' (1):6565 | |
| A ready-to-use machine learning tool for symmetric multi-modality registration of brain MRI. Description: Iglesias, Juan Eugenio. A ready-to-use machine learning tool for symmetric multi-modality registration of brain MRI. ''Sci Rep''. 2023 Apr 24; '''13''' (1):6657 | |
| Whole-brain diffusion tensor imaging predicts 6-month functional outcome in acute intracerebral haemorrhage. Description: Schwarz, G, et al. Whole-brain diffusion tensor imaging predicts 6-month functional outcome in acute intracerebral haemorrhage. ''J Neurol''. 2023 May; '''270''' (5):2640-2648 | |
| Extensive T1-weighted MRI Preprocessing Improves Generalizability of Deep Brain Age Prediction Models. Description: Dular, Lara, et al. Extensive T1-weighted MRI Preprocessing Improves Generalizability of Deep Brain Age Prediction Models. ''bioRxiv''. 2023 May 10; | |
| Tau accumulation in autosomal dominant Alzheimer's disease: a longitudinal [(18)F]flortaucipir study. Description: O'Connor, Antoinette, et al. Tau accumulation in autosomal dominant Alzheimer's disease: a longitudinal [(18)F]flortaucipir study. ''Alzheimers Res Ther''. 2023 May 25; '''15''' (1):99 | |
| Image guidance and interfractional anatomical variation in paediatric abdominal radiotherapy. Description: Taylor, Sabrina, et al. Image guidance and interfractional anatomical variation in paediatric abdominal radiotherapy. ''Br J Radiol''. 2023 Jun 1; '''96''' (1146):20230058 | |
| Isotoxic dose escalated radiotherapy for glioblastoma based on diffusion-weighted MRI and tumor control probability-an in-silico study. Description: Pang, Yaru, et al. Isotoxic dose escalated radiotherapy for glioblastoma based on diffusion-weighted MRI and tumor control probability-an in-silico study. ''Br J Radiol''. 2023 Jun 1; '''96''' (1146):20220384 | |
| Assessing informative tract segmentation and nTMS for pre-operative planning. Description: Lucena, Oeslle, et al. Assessing informative tract segmentation and nTMS for pre-operative planning. ''J Neurosci Methods''. 2023 Aug 1; '''396''': 109933 | |
| Extent of piriform cortex resection in children with temporal lobe epilepsy. Description: Piper, Rory J, et al. Extent of piriform cortex resection in children with temporal lobe epilepsy. ''Ann Clin Transl Neurol''. 2023 Sep; '''10''' (9):1613-1622 | |
| Subregional analysis of striatum iron in Parkinson's disease and rapid eye movement sleep behaviour disorder. Description: Alushaj, Erind, et al. Subregional analysis of striatum iron in Parkinson's disease and rapid eye movement sleep behaviour disorder. ''Neuroimage Clin''. 2023 Sep 28; '''40''': 103519 | |
| Quantitative susceptibility mapping identifies hippocampal and other subcortical grey matter tissue composition changes in temporal lobe epilepsy. Description: Kiersnowski, Oliver C, et al. Quantitative susceptibility mapping identifies hippocampal and other subcortical grey matter tissue composition changes in temporal lobe epilepsy. ''Hum Brain Mapp''. 2023 Oct 15; '''44''' (15):5047-5064 | |
| Diffusion MRI of the facial-vestibulocochlear nerve complex: a prospective clinical validation study. Description: Shapey, Jonathan, et al. Diffusion MRI of the facial-vestibulocochlear nerve complex: a prospective clinical validation study. ''Eur Radiol''. 2023 Nov; '''33''' (11):8067-8076 | |
| Quantitative magnetic resonance imaging reflects different levels of histologically determined myelin densities in multiple sclerosis, including remyelination in inactive multiple sclerosis lesions. Description: Wiggermann, Vanessa, et al. Quantitative magnetic resonance imaging reflects different levels of histologically determined myelin densities in multiple sclerosis, including remyelination in inactive multiple sclerosis lesions. ''Brain Pathol''. 2023 Nov; '''33''' (6):e13150 | |
| Unsupervised deep learning registration model for multimodal brain images. Description: Abbasi, Samaneh, et al. Unsupervised deep learning registration model for multimodal brain images. ''J Appl Clin Med Phys''. 2023 Nov; '''24''' (11):e14177 | |
| Subject-Specific Automatic Reconstruction of White Matter Tracts. Description: Meesters, Stephan, et al. Subject-Specific Automatic Reconstruction of White Matter Tracts. ''J Digit Imaging''. 2023 Dec; '''36''' (6):2648-2661 | |
| Three-dimensional histology reveals dissociable human hippocampal long axis gradients of Alzheimer's pathology. Description: Ortega-Cruz, Diana, et al. Three-dimensional histology reveals dissociable human hippocampal long axis gradients of Alzheimer's pathology. ''bioRxiv''. 2023 Dec 7; | |
| Deep learning for automatic segmentation of vestibular schwannoma: a retrospective study from multi-center routine MRI. Description: Kujawa, Aaron, et al. Deep learning for automatic segmentation of vestibular schwannoma: a retrospective study from multi-center routine MRI. ''Front Comput Neurosci''. 2024; '''18''': 1365727 | |
| Sex and age effects on gray matter volume trajectories in young children with prenatal alcohol exposure. Description: Long, Madison, et al. Sex and age effects on gray matter volume trajectories in young children with prenatal alcohol exposure. ''Front Hum Neurosci''. 2024; '''18''': 1379959 | |
| Similarity-driven motion-resolved reconstruction for ferumoxytol-enhanced whole-heart MRI in congenital heart disease. Description: Romanin, Ludovica, et al. Similarity-driven motion-resolved reconstruction for ferumoxytol-enhanced whole-heart MRI in congenital heart disease. ''PLoS One''. 2024; '''19''' (6):e0304612 | |
| Respiratory motion modelling for MR-guided lung cancer radiotherapy: model development and geometric accuracy evaluation. Description: Eiben, Bjorn, et al. Respiratory motion modelling for MR-guided lung cancer radiotherapy: model development and geometric accuracy evaluation. ''Phys Med Biol''. 2024 Feb 19; '''69''' (5): | |
| Independent component analysis (ICA) applied to dynamic oxygen-enhanced MRI (OE-MRI) for robust functional lung imaging at 3 T. Description: Needleman, Sarah H, et al. Independent component analysis (ICA) applied to dynamic oxygen-enhanced MRI (OE-MRI) for robust functional lung imaging at 3 T. ''Magn Reson Med''. 2024 Mar; '''91''' (3):955-971 | |
| Individualized white matter connectivity of the articulatory pathway: An ultra-high field study. Description: Lankinen, Kaisu, et al. Individualized white matter connectivity of the articulatory pathway: An ultra-high field study. ''Brain Lang''. 2024 Mar; '''250''': 105391 | |
| Photoreceptor Integrity in MEWDS: Longitudinal Structure-Function Correlations. Description: Cicinelli, Maria Vittoria, et al. Photoreceptor Integrity in MEWDS: Longitudinal Structure-Function Correlations. ''Invest Ophthalmol Vis Sci''. 2024 Apr 1; '''65''' (4):28 | |
| Three-dimensional histology reveals dissociable human hippocampal long-axis gradients of Alzheimer's pathology. Description: Ortega-Cruz, Diana, et al. Three-dimensional histology reveals dissociable human hippocampal long-axis gradients of Alzheimer's pathology. ''Alzheimers Dement''. 2024 Apr; '''20''' (4):2606-2619 | |
| Impact of amyloid and tau positivity on longitudinal brain atrophy in cognitively normal individuals. Description: Fujishima, Motonobu, et al. Impact of amyloid and tau positivity on longitudinal brain atrophy in cognitively normal individuals. ''Alzheimers Res Ther''. 2024 Apr 10; '''16''' (1):77 | |
| Regional nigral neuromelanin degeneration in asymptomatic leucine-rich repeat kinase 2 gene carrier using MRI. Description: Gao, Linlin, et al. Regional nigral neuromelanin degeneration in asymptomatic leucine-rich repeat kinase 2 gene carrier using MRI. ''Sci Rep''. 2024 May 9; '''14''' (1):10621 | |
| Improving explanation of motor disability with diffusion-based graph metrics at onset of the first demyelinating event. Description: Foster, Michael A, et al. Improving explanation of motor disability with diffusion-based graph metrics at onset of the first demyelinating event. ''Mult Scler''. 2024 Jun; '''30''' (7):800-811 | |
| A machine-learning regional clustering approach to understand ventilator-induced lung injury: a proof-of-concept experimental study. Description: Cruces, Pablo, et al. A machine-learning regional clustering approach to understand ventilator-induced lung injury: a proof-of-concept experimental study. ''Intensive Care Med Exp''. 2024 Jul 2; '''12''' (1):60 |