PubMed Mentions
The links below are to publications on PubMed referring to STAPLE. This list is gathered weekly from PubMed automatically.
| Publication/References | |
| Thalamocortical structural connectivity abnormalities in drug-resistant generalized epilepsy: A diffusion tensor imaging study. Description: Zhang, Yiming, et al. Thalamocortical structural connectivity abnormalities in drug-resistant generalized epilepsy: A diffusion tensor imaging study. ''Brain Res''. 2020 Jan 15; '''1727''': 146558 | |
| Investigation of biases in convolutional neural networks for semantic segmentation using performance sensitivity analysis. Description: Gullmar, Daniel, et al. Investigation of biases in convolutional neural networks for semantic segmentation using performance sensitivity analysis. ''Z Med Phys''. 2022 Aug; '''32''' (3):346-360 | |
| Bassoon contributes to tau-seed propagation and neurotoxicity. Description: Martinez, Pablo, et al. Bassoon contributes to tau-seed propagation and neurotoxicity. ''Nat Neurosci''. 2022 Dec; '''25''' (12):1597-1607 | |
| Ts66Yah, a mouse model of Down syndrome with improved construct and face validity. Description: Duchon, Arnaud, et al. Ts66Yah, a mouse model of Down syndrome with improved construct and face validity. ''Dis Model Mech''. 2022 Dec 1; '''15''' (12): | |
| Deep-learning-based AI for evaluating estimated nonperfusion areas requiring further examination in ultra-widefield fundus images. Description: Inoda, Satoru, et al. Deep-learning-based AI for evaluating estimated nonperfusion areas requiring further examination in ultra-widefield fundus images. ''Sci Rep''. 2022 Dec 17; '''12''' (1):21826 | |
| Cell segmentation in images without structural fluorescent labels. Description: Zyss, Daniel, et al. Cell segmentation in images without structural fluorescent labels. ''Biol Imaging''. 2023; '''3''': e16 | |
| CrossMoDA 2021 challenge: Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation. Description: Dorent, Reuben, et al. CrossMoDA 2021 challenge: Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation. ''Med Image Anal''. 2023 Jan; '''83''': 102628 | |
| Segmenting white matter hyperintensities on isotropic three-dimensional Fluid Attenuated Inversion Recovery magnetic resonance images: Assessing deep learning tools on a Norwegian imaging database. Description: Rovang, Martin Soria, et al. Segmenting white matter hyperintensities on isotropic three-dimensional Fluid Attenuated Inversion Recovery magnetic resonance images: Assessing deep learning tools on a Norwegian imaging database. ''PLoS One''. 2023; '''18''' (8):e0285683 | |
| Chaksu: A glaucoma specific fundus image database. Description: Kumar, J R Harish, et al. Chaksu: A glaucoma specific fundus image database. ''Sci Data''. 2023 Feb 3; '''10''' (1):70 | |
| Detailed anatomic segmentations of a fetal brain diffusion tensor imaging atlas between 23 and 30 weeks of gestation. Description: Calixto, Camilo, et al. Detailed anatomic segmentations of a fetal brain diffusion tensor imaging atlas between 23 and 30 weeks of gestation. ''Hum Brain Mapp''. 2023 Mar; '''44''' (4):1593-1602 | |
| Large scale crowdsourced radiotherapy segmentations across a variety of cancer anatomic sites. Description: Wahid, Kareem A, et al. Large scale crowdsourced radiotherapy segmentations across a variety of cancer anatomic sites. ''Sci Data''. 2023 Mar 22; '''10''' (1):161 | |
| Unbiased analysis of the dorsal root ganglion after peripheral nerve injury: no neuronal loss, no gliosis, but satellite glial cell plasticity. Description: Schulte, Annemarie, et al. Unbiased analysis of the dorsal root ganglion after peripheral nerve injury: no neuronal loss, no gliosis, but satellite glial cell plasticity. ''Pain''. 2023 Apr 1; '''164''' (4):728-740 | |
| Prostate stereotactic body radiotherapy: quantifying intra-fraction motion and calculating margins using the new BIR geometric uncertainties in daily online IGRT recommendations. Description: McNeice, Joseph M, et al. Prostate stereotactic body radiotherapy: quantifying intra-fraction motion and calculating margins using the new BIR geometric uncertainties in daily online IGRT recommendations. ''Br J Radiol''. 2023 Jun 1; '''96''' (1146):20220852 | |
| Segmentation of 4D Flow MRI: Comparison between 3D Deep Learning and Velocity-Based Level Sets. Description: Barrera-Naranjo, Armando, et al. Segmentation of 4D Flow MRI: Comparison between 3D Deep Learning and Velocity-Based Level Sets. ''J Imaging''. 2023 Jun 19; '''9''' (6): | |
| The Cell Tracking Challenge: 10 years of objective benchmarking. Description: Maska, Martin, et al. The Cell Tracking Challenge: 10 years of objective benchmarking. ''Nat Methods''. 2023 Jul; '''20''' (7):1010-1020 | |
| Automated hippocampal segmentation algorithms evaluated in stroke patients. Description: Schell, Marianne, et al. Automated hippocampal segmentation algorithms evaluated in stroke patients. ''Sci Rep''. 2023 Jul 20; '''13''' (1):11712 | |
| Determining The Role Of Radiation Oncologist Demographic Factors On Segmentation Quality: Insights From A Crowd-Sourced Challenge Using Bayesian Estimation. Description: Wahid, Kareem A, et al. Determining The Role Of Radiation Oncologist Demographic Factors On Segmentation Quality: Insights From A Crowd-Sourced Challenge Using Bayesian Estimation. ''medRxiv''. 2023 Sep 5; | |
| Dosimetry impact of distinct gating strategies in cine MR image-guided breath-hold pancreatic cancer radiotherapy. Description: Dong, Yuyan, et al. Dosimetry impact of distinct gating strategies in cine MR image-guided breath-hold pancreatic cancer radiotherapy. ''J Appl Clin Med Phys''. 2023 Oct; '''24''' (10):e14078 | |
| Deep learning-based algorithm for postoperative glioblastoma MRI segmentation: a promising new tool for tumor burden assessment. Description: Bianconi, Andrea, et al. Deep learning-based algorithm for postoperative glioblastoma MRI segmentation: a promising new tool for tumor burden assessment. ''Brain Inform''. 2023 Oct 6; '''10''' (1):26 | |
| Reproducibility of APT-weighted CEST-MRI at 3T in healthy brain and tumor across sessions and scanners. Description: Wu, Yulun, et al. Reproducibility of APT-weighted CEST-MRI at 3T in healthy brain and tumor across sessions and scanners. ''Sci Rep''. 2023 Oct 23; '''13''' (1):18115 | |
| Feasibility evaluation of novel AI-based deep-learning contouring algorithm for radiotherapy. Description: Maduro Bustos, Luis A, et al. Feasibility evaluation of novel AI-based deep-learning contouring algorithm for radiotherapy. ''J Appl Clin Med Phys''. 2023 Nov; '''24''' (11):e14090 | |
| Robust in-vehicle heartbeat detection using multimodal signal fusion. Description: Warnecke, Joana M, et al. Robust in-vehicle heartbeat detection using multimodal signal fusion. ''Sci Rep''. 2023 Nov 27; '''13''' (1):20864 | |
| Motoneuron-driven computational muscle modelling with motor unit resolution and subject-specific musculoskeletal anatomy. Description: Caillet, Arnault H, et al. Motoneuron-driven computational muscle modelling with motor unit resolution and subject-specific musculoskeletal anatomy. ''PLoS Comput Biol''. 2023 Dec; '''19''' (12):e1011606 | |
| A Technique to Enable Efficient Adaptive Radiation Therapy: Automated Contouring of Prostate and Adjacent Organs. Description: Hyer, Daniel E, et al. A Technique to Enable Efficient Adaptive Radiation Therapy: Automated Contouring of Prostate and Adjacent Organs. ''Adv Radiat Oncol''. 2024 Jan; '''9''' (1):101336 | |
| Posterior tibial slope influences joint mechanics and soft tissue loading after total knee arthroplasty. Description: Guo, Ning, et al. Posterior tibial slope influences joint mechanics and soft tissue loading after total knee arthroplasty. ''Front Bioeng Biotechnol''. 2024; '''12''': 1352794 | |
| Two-dimensional segmentation fusion tool: an extensible, free-to-use, user-friendly tool for combining different bidimensional segmentations. Description: Piccinini, Filippo, et al. Two-dimensional segmentation fusion tool: an extensible, free-to-use, user-friendly tool for combining different bidimensional segmentations. ''Front Bioeng Biotechnol''. 2024; '''12''': 1339723 | |
| Utility of 68Ga-DOTATATE PET-MRI for Gamma Knife(R) stereotactic radiosurgery treatment planning for meningioma. Description: Ratnayake, Gishan, et al. Utility of 68Ga-DOTATATE PET-MRI for Gamma Knife(R) stereotactic radiosurgery treatment planning for meningioma. ''Br J Radiol''. 2024 Jan 23; '''97''' (1153):180-185 | |
| Explainable hybrid vision transformers and convolutional network for multimodal glioma segmentation in brain MRI. Description: Zeineldin, Ramy A, et al. Explainable hybrid vision transformers and convolutional network for multimodal glioma segmentation in brain MRI. ''Sci Rep''. 2024 Feb 14; '''14''' (1):3713 | |
| Fully automated deep learning based auto-contouring of liver segments and spleen on contrast-enhanced CT images. Description: Gupta, Aashish C, et al. Fully automated deep learning based auto-contouring of liver segments and spleen on contrast-enhanced CT images. ''Sci Rep''. 2024 Feb 26; '''14''' (1):4678 | |
| Urethra contouring on computed tomography urethrogram versus magnetic resonance imaging for stereotactic body radiotherapy in prostate cancer. Description: Ong, Wee Loon, et al. Urethra contouring on computed tomography urethrogram versus magnetic resonance imaging for stereotactic body radiotherapy in prostate cancer. ''Clin Transl Radiat Oncol''. 2024 Mar; '''45''': 100722 | |
| Development and validation of a semi-automated and unsupervised method for femur segmentation from CT. Description: Aldieri, Alessandra, et al. Development and validation of a semi-automated and unsupervised method for femur segmentation from CT. ''Sci Rep''. 2024 Mar 28; '''14''' (1):7403 | |
| A detailed spatio-temporal atlas of the white matter tracts for the fetal brain. Description: Calixto, Camilo, et al. A detailed spatio-temporal atlas of the white matter tracts for the fetal brain. ''bioRxiv''. 2024 Apr 27; | |
| Associations Between Radiation Oncologist Demographic Factors and Segmentation Similarity Benchmarks: Insights From a Crowd-Sourced Challenge Using Bayesian Estimation. Description: Wahid, Kareem A, et al. Associations Between Radiation Oncologist Demographic Factors and Segmentation Similarity Benchmarks: Insights From a Crowd-Sourced Challenge Using Bayesian Estimation. ''JCO Clin Cancer Inform''. 2024 Jun; '''8''': e2300174 |