The links below are to publications on PubMed referring to Waxholm Space Atlas of the Sprague Dawley Rat Brain. This list is gathered weekly from PubMed automatically and was last updated on October 20, 2025.

Publication/References
Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging.
Description: Osen, Kirsten K, et al. Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging. ''Neuroimage''. 2019 Oct 1; '''199''': 38-56
Histological E-data Registration in rodent Brain Spaces.
Description: Fuglstad, Jingyi Guo, et al. Histological E-data Registration in rodent Brain Spaces. ''Elife''. 2023 Jan 13; '''12''':
Are standing osmotic gradients the main driver of cerebrospinal fluid production? A computational analysis.
Description: Razzaghi Khamesi, Pooya, et al. Are standing osmotic gradients the main driver of cerebrospinal fluid production? A computational analysis. ''Fluids Barriers CNS''. 2023 Mar 13; '''20''' (1):18
A Timm-Nissl multiplane microscopic atlas of rat brain zincergic terminal fields and metal-containing glia.
Description: Blixhavn, Camilla H, et al. A Timm-Nissl multiplane microscopic atlas of rat brain zincergic terminal fields and metal-containing glia. ''Sci Data''. 2023 Mar 21; '''10''' (1):150
Spike-based coupling between single neurons and populations across rat sensory cortices, perirhinal cortex, and hippocampus.
Description: Dorman, Reinder, et al. Spike-based coupling between single neurons and populations across rat sensory cortices, perirhinal cortex, and hippocampus. ''Cereb Cortex''. 2023 Jun 20; '''33''' (13):8247-8264
AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures.
Description: Kleven, Heidi, et al. AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures. ''Sci Data''. 2023 Jul 26; '''10''' (1):486
The efferent connections of the orbitofrontal, posterior parietal, and insular cortex of the rat brain.
Description: Reiten, Ingrid, et al. The efferent connections of the orbitofrontal, posterior parietal, and insular cortex of the rat brain. ''Sci Data''. 2023 Sep 21; '''10''' (1):645
Waxholm Space atlas of the rat brain: a 3D atlas supporting data analysis and integration.
Description: Kleven, Heidi, et al. Waxholm Space atlas of the rat brain: a 3D atlas supporting data analysis and integration. ''Nat Methods''. 2023 Nov; '''20''' (11):1822-1829
The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases.
Description: Blixhavn, Camilla H, et al. The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases. ''Front Neuroinform''. 2024; '''18''': 1284107
Oxytocin-induced birth causes sex-specific behavioral and brain connectivity changes in developing rat offspring.
Description: Giri, Tusar, et al. Oxytocin-induced birth causes sex-specific behavioral and brain connectivity changes in developing rat offspring. ''iScience''. 2024 Feb 16; '''27''' (2):108960
Development and advancements in rodent MRI-based brain atlases.
Description: Ma, Xiaoyi, et al. Development and advancements in rodent MRI-based brain atlases. ''Heliyon''. 2024 Mar 30; '''10''' (6):e27421