sdm-help-list
sdm-help-list > RE: Error on launch Preprocessing
Dec 17, 2022 05:12 AM | Mekha Thomas
RE: Error on launch Preprocessing
Originally posted by Anton Albajes-Eizagirre:
I was conducting a Coordinate based meta-analysis of networks ,I have only coordinate files for each study but no maps. I have saved my files as "MF1.spm_mni.txt and MF2.spm_mni.txt" and the sdm table for them as "MF1 and MF2" respectively, all in the same working directory as well (D:/Mekha/SDM).
After launching preprocessing ,I got the following warning 'Launched: sdm pp gray matter, 1, 20, gray matter, 2 Analyzing coordinates';
"WARNING: File 'MF1.nii.gz', 'MF1.spm_mni.txt', 'MF1.fsl_mni.txt', 'MF1.other_mni.txt', 'MF1.spm_brett.txt', 'MF1.fsl_brett.txt', 'MF1.other_tal.txt' or 'MF1.no_peaks.txt' not found."
Could you please help me understand and resolve the same ,as I have left the analysis overnight to run as well but it showed no progress ,please let me know what can be done further.
A reply at the earliest will be deeply appreciated as this work is a part of my thesis which is to be submitted this month.
Thanks and regards,
Mekha
Dear Fangyoumutu,
It appears that SDM can't find any map/file for study Menka. Can you please double check the C:/Program Files/SDM Meta Analysis/tutorial directory to assert that there is a file for the menka study?
If problem persists, could you please send us a copy of the tutorial directory to see if we can reproduce the problem?
Best,
Anton
Dear Mr.Anton,It appears that SDM can't find any map/file for study Menka. Can you please double check the C:/Program Files/SDM Meta Analysis/tutorial directory to assert that there is a file for the menka study?
If problem persists, could you please send us a copy of the tutorial directory to see if we can reproduce the problem?
Best,
Anton
I was conducting a Coordinate based meta-analysis of networks ,I have only coordinate files for each study but no maps. I have saved my files as "MF1.spm_mni.txt and MF2.spm_mni.txt" and the sdm table for them as "MF1 and MF2" respectively, all in the same working directory as well (D:/Mekha/SDM).
After launching preprocessing ,I got the following warning 'Launched: sdm pp gray matter, 1, 20, gray matter, 2 Analyzing coordinates';
"WARNING: File 'MF1.nii.gz', 'MF1.spm_mni.txt', 'MF1.fsl_mni.txt', 'MF1.other_mni.txt', 'MF1.spm_brett.txt', 'MF1.fsl_brett.txt', 'MF1.other_tal.txt' or 'MF1.no_peaks.txt' not found."
Could you please help me understand and resolve the same ,as I have left the analysis overnight to run as well but it showed no progress ,please let me know what can be done further.
A reply at the earliest will be deeply appreciated as this work is a part of my thesis which is to be submitted this month.
Thanks and regards,
Mekha
Threaded View
| Title | Author | Date |
|---|---|---|
| fangyoumutu | Oct 23, 2018 | |
| Anton Albajes-Eizagirre | Dec 5, 2018 | |
| Mekha Thomas | Dec 17, 2022 | |
| Xinyun Lin | Jul 2, 2024 | |