help > Failure opening ImageJ/SNT SWC files in Vaa3d
Jun 8, 2023  03:06 PM | muhibmethani
Failure opening ImageJ/SNT SWC files in Vaa3d

Hello!


I am trying to shift to Vaa3D for tracing but I want to be able to use traces that I have completed previously in the SNT plugin on ImageJ. Currently, whenever I save my traces on SNT as an SWC file and try to open that same file on Vaa3D, I get an image showing a linear bounding box and no traces. How can I view my traces from SNT on Vaa3D? I have attached a screenshot of the 3D viewer without the axes when I try to open the file and as you can see, the bounding box is linear with no traces inside.


I have tried converting the SWC file to an ESWC file and I have also tried sorting the SWC file (I don't know what that does exactly but I thought I might give it a try). Neither of these things have worked. I also had the software check for updates and it says that "Your Vaa3D is NOT older than the current binary release. You do NOT have to update for now." Some help would be greatly appreciated!


 

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TitleAuthorDate
Failure opening ImageJ/SNT SWC files in Vaa3d
muhibmethani Jun 8, 2023
muhibmethani Jun 27, 2023
Lingli Zhang Jun 30, 2023
Lingli Zhang Jun 16, 2023
muhibmethani Jun 21, 2023
Lingli Zhang Jun 24, 2023
muhibmethani Jun 27, 2023
Lingli Zhang Jun 30, 2023
Lingli Zhang Jun 30, 2023
muhibmethani Jun 21, 2023
muhibmethani Jun 21, 2023
muhibmethani Jun 21, 2023